The following Matlab project contains the source code and Matlab examples used for biodata toolbox.
The Biodata toolbox is a comprehensive database system that stores measurement signals and related data, such as sample labels, signal collection date, etc.
The source code and files included in this project are listed in the project files section, please make sure whether the listed source code meet your needs there.
Project Files:
| File Name | Size |
|---|---|
| About.m | 4279 |
| AdaptPlot.m | 4747 |
| AddClassdes.m | 4976 |
| AddEmptyClassdes.m | 4189 |
| AddHistory.m | 4007 |
| AddMapDescription.m | 6815 |
| AddNrClass.m | 3342 |
| AddOneSample.m | 6158 |
| AddSample.m | 6482 |
| AddSampleDescriptions.m | 5327 |
| Auto.m | 3733 |
| Biodata.m | 9529 |
| BTree.m | 5066 |
| CalculateMeans.m | 12038 |
| CalculateMeans2.m | 10692 |
| Clean.m | 3484 |
| ClearAnalysisList.m | 3518 |
| ClearTrees.m | 3569 |
| Count.m | 3340 |
| CountClass.m | 3301 |
| Create2DReactionTables.m | 6997 |
| CTreeBuild.m | 4260 |
| CTreeEval.m | 3890 |
| Cumtrapz.m | 3332 |
| DeleteClassdes.m | 4341 |
| DeleteMarkedSamples.m | 4076 |
| DeleteSampleCombinations.m | 5899 |
| DeleteSampleDescriptions.m | 3795 |
| delsample.m | 4895 |
| diff.m | 4750 |
| display.m | 3225 |
| DoAnalysis.m | 11188 |
| DoAnalysisForIdentification.m | 8190 |
| DoIdentification.m | 13942 |
| DoIdentification2.m | 9940 |
| EliminateOutliers.m | 6245 |
| EliminateOutlyingSamplesInGroup.m | 6148 |
| EliminateSmallGroups.m | 6263 |
| EMSC.m | 4971 |
| FFT2Dcor.m | 5808 |
| FindIndexOfFreq.m | 4120 |
| GetAnalysisList.m | 4605 |
| GetBDinfo.m | 8844 |
| GetClassComb.m | 9774 |
| GetClassList.m | 3634 |
| GetClassVal.m | 4290 |
| GetLastAnalysis.m | 3602 |
| GetLv.m | 3036 |
| GetSamples.m | 4700 |
| GetXRange.m | 4052 |
| GetXRanges.m | 4414 |
| Hilb2DCor.m | 5765 |
| Hilb2DCorMW.m | 10026 |
| Hilb2DCorNCI.m | 8219 |
| Hilb2DCorSS.m | 5275 |
| IsClassDes.m | 3745 |
| join.m | 17758 |
| lda.m | 7749 |
| LOO.m | 5406 |
| mean.m | 4121 |
| mean_wo.m | 4310 |
| mean_woK.m | 4313 |
| median.m | 4004 |
| mjoin.m | 3477 |
| mncn.m | 3647 |
| Mult.m | 4027 |
| normaliz.m | 4076 |
| normalize.m | 3059 |
| pca.m | 5032 |
| plot.m | 7370 |
| plot2Dc.m | 9787 |
| plot2Dfreq.m | 8487 |
| plot2Dphase.m | 4194 |
| plot2Dsimple.m | 5375 |
| plotb.m | 8295 |
| plotchar.m | 8455 |
| plotdiff.m | 7351 |
| plotloads.m | 5462 |
| plotn.m | 7921 |
| plotnfigs.m | 7527 |
| PlotOneMap.m | 4220 |
| plotpoint.m | 16574 |
| pls.m | 5617 |
| AdaptPlotReduced.m | 5600 |
| AddAnalysis.m | 3338 |
| CheckCoordinates.m | 3803 |
| CheckIndices.m | 4020 |
| CheckProductIn2DProductTable.m | 7603 |
| Config.m | 5249 |
| DirectEMSCAnalysis.m | 290 |
| DoplotSimpleLegend.m | 4445 |
| GetAnalysisStructure.m | 3696 |
| GetClassindex.m | 4190 |
| GetDefaultPcaValues.m | 3169 |
| GetSamplePos.m | 3647 |
| IndicatorFunctionOfPCs.m | 3122 |
| IsBTree.m | 4286 |
| MakeEMSCZYDataFiles.m | 3800 |
| MakeRepresentableStringFrom2DGroupAssignment.m | 3832 |
| Obtain2DMWSequence.m | 10972 |
| Obtain2DPeakGroups.m | 6275 |
| PCAPlots.m | 3745 |
| PCAPT.m | 6302 |
| PCATC.m | 5380 |
| PlotByClassColor.m | 6653 |
| PlotEllipsoids.m | 3641 |
| PlotLegend.m | 3656 |
| PLSPT.m | 6721 |
| PLSTC.m | 7016 |
| QResiduals.m | 3296 |
| SetXAxis.m | 3412 |
| TsqOutliersCompare.m | 4007 |
| RandomizeOrder.m | 3280 |
| rAuto.m | 3875 |
| rEliminateOutliers.m | 6438 |
| rmncn.m | 3644 |
| Rndcv.m | 10848 |
| rPCA.m | 5409 |
| rsnv.m | 3473 |
| rTsqOutliers.m | 4900 |
| SaveClassdes.m | 3633 |
| savgol.m | 4014 |
| SelectSampleCombinations.m | 4807 |
| selectsamples.m | 8169 |
| SetUpdating.m | 3943 |
| ShowAnalysisList.m | 3405 |
| ShowClassComb.m | 4766 |
| ShowHistory.m | 3517 |
| snv.m | 3408 |
| StartEMSC.m | 7314 |
| std.m | 3984 |
| StopEMSC.m | 7071 |
| subback.m | 3906 |
| subbackmod.m | 4537 |
| subsasgn.m | 10016 |
| SubsClassDes.m | 5101 |
| SubsClassDes2.m | 4409 |
| subsref.m | 9152 |
| Subtract.m | 3968 |
| TransNorm.m | 4735 |
| trimmean.m | 4042 |
| TsqOutliers.m | 4991 |
| Varsel.m | 9663 |
| version.txt | 23 |
| viselim.m | 4104 |
| WithHold.m | 7816 |
| CellDisp.m | 3316 |
| CellString2Double.m | 3110 |
| FirstMax.m | 3176 |
| FirstMin.m | 3166 |
| GetComb.m | 4704 |
| GetXRanges.m | 3392 |
| INDFunc.m | 4787 |
| IsToolboxPresent.m | 3833 |
| LoadFile.m | 3206 |
| mean_woK.m | 7858 |
| mncn.m | 2998 |
| NDIND.m | 4756 |
| nmin.m | 3199 |
| normaliz.m | 3177 |
| printfigs.m | 3654 |
| QResidualsLimit.m | 3926 |
| ReplaceTabBySpaces.m | 2947 |
| SaveCell.m | 3596 |
| SaveFile.m | 3452 |
| savgol.m | 3526 |
| scale.m | 3428 |
| sgsdf.m | 5128 |
| GetPeakPos.m | 5062 |
| GetPeakPos2.m | 5385 |
| GetPeakPosFFT.m | 4202 |
| PeakPosFFT.m | 6956 |
| savgol.m | 3701 |
| sgsdf.m | 5130 |
| ShowPeakName.m | 5838 |
| ShowPeakName2.m | 4549 |
| ShowPeakNameBothSides.m | 5015 |
| snv.m | 3045 |
| SsqTable.m | 3401 |
| subback.m | 5910 |
| subbackmod.m | 7954 |
| TLim.m | 4579 |
| TransNorm.m | 4406 |
| ControlSampleNr.m | 3954 |
| ConvertInput2Num.m | 3473 |
| GetBdVar.m | 3369 |
| GetSelectedBd.m | 3335 |
| graphmap.fig | 49480 |
| graphmap.m | 45565 |
| graphplot.fig | 67728 |
| graphplot.m | 52403 |
| graphsel.fig | 34032 |
| graphsel.m | 27213 |
| graphtools.fig | 48512 |
| graphtools.m | 33486 |
| InitializeGraphplot.m | 3323 |
| InitializeGraphsel.m | 3313 |
| InitializeGraphtools.m | 3354 |
| LoadBdVar.m | 3702 |
| SetAsSelectedBd.m | 3327 |
| TransformClassdes.m | 3058 |
| Biodata manual.pdf | 369233 |
| isvector.m | 3541 |
| Contents.m | 85 |
| gpl-3.0.pdf | 70632 |
| About.m | 3145 |
| Add.m | 14829 |
| BTree.m | 4681 |
| Count.m | 4101 |
| display.m | 2930 |
| getitem.m | 3264 |
| GetItems.m | 4497 |
| GetItemWithMostValues.m | 3506 |
| GetSortedItemsList.m | 3236 |
| history.txt | 511 |
| isitem.m | 3324 |
| Plot.m | 3538 |
| ConvertToBTree.m | 5210 |
| DoCompare.m | 4493 |
| GetThem.m | 3812 |
| searchitem.m | 3963 |
| subsasgn.m | 3833 |
| subsref.m | 3945 |
| version.txt | 51 |
| WriteContentsToFile.m | 4330 |
| CatBlank.m | 3285 |
| loadcell.m | 6019 |
| LocateItem.m | 4229 |
| MakeVector.m | 3487 |
| mystrcmp.m | 3945 |
| str.m | 5496 |
| str2.m | 3557 |
| trimleft.m | 3040 |
| trimright.m | 3063 |
| trimstr.m | 2996 |
| Contents.m | 79 |
| DetermineClusters.m | 6494 |
| GetSPCAxisTypes.m | 7169 |
| GetTechniques.m | 4905 |
| gpl-3.0.pdf | 70632 |
| GSDendrogram.m | 10429 |
| GSImportspec.m | 10716 |
| GSSpcRead.m | 33906 |
| GSSpcReadStructure.m | 3194 |
| GSSpcWrite.m | 37834 |
| GSTools 0.4.3 manual.pdf | 91185 |
| GSToolsAbout.m | 3157 |
| history.html | 3319 |
| license.txt | 1314 |
