Biodata toolbox in matlab

The following Matlab project contains the source code and Matlab examples used for biodata toolbox. The Biodata toolbox is a comprehensive database system that stores measurement signals and related data, such as sample labels, signal collection date, etc.

The source code and files included in this project are listed in the project files section, please make sure whether the listed source code meet your needs there.

Project Files: 

File NameSize
About.m 4279
AdaptPlot.m 4747
AddClassdes.m 4976
AddEmptyClassdes.m 4189
AddHistory.m 4007
AddMapDescription.m 6815
AddNrClass.m 3342
AddOneSample.m 6158
AddSample.m 6482
AddSampleDescriptions.m 5327
Auto.m 3733
Biodata.m 9529
BTree.m 5066
CalculateMeans.m 12038
CalculateMeans2.m 10692
Clean.m 3484
ClearAnalysisList.m 3518
ClearTrees.m 3569
Count.m 3340
CountClass.m 3301
Create2DReactionTables.m 6997
CTreeBuild.m 4260
CTreeEval.m 3890
Cumtrapz.m 3332
DeleteClassdes.m 4341
DeleteMarkedSamples.m 4076
DeleteSampleCombinations.m 5899
DeleteSampleDescriptions.m 3795
delsample.m 4895
diff.m 4750
display.m 3225
DoAnalysis.m 11188
DoAnalysisForIdentification.m 8190
DoIdentification.m 13942
DoIdentification2.m 9940
EliminateOutliers.m 6245
EliminateOutlyingSamplesInGroup.m 6148
EliminateSmallGroups.m 6263
EMSC.m 4971
FFT2Dcor.m 5808
FindIndexOfFreq.m 4120
GetAnalysisList.m 4605
GetBDinfo.m 8844
GetClassComb.m 9774
GetClassList.m 3634
GetClassVal.m 4290
GetLastAnalysis.m 3602
GetLv.m 3036
GetSamples.m 4700
GetXRange.m 4052
GetXRanges.m 4414
Hilb2DCor.m 5765
Hilb2DCorMW.m 10026
Hilb2DCorNCI.m 8219
Hilb2DCorSS.m 5275
IsClassDes.m 3745
join.m 17758
lda.m 7749
LOO.m 5406
mean.m 4121
mean_wo.m 4310
mean_woK.m 4313
median.m 4004
mjoin.m 3477
mncn.m 3647
Mult.m 4027
normaliz.m 4076
normalize.m 3059
pca.m 5032
plot.m 7370
plot2Dc.m 9787
plot2Dfreq.m 8487
plot2Dphase.m 4194
plot2Dsimple.m 5375
plotb.m 8295
plotchar.m 8455
plotdiff.m 7351
plotloads.m 5462
plotn.m 7921
plotnfigs.m 7527
PlotOneMap.m 4220
plotpoint.m 16574
pls.m 5617
AdaptPlotReduced.m 5600
AddAnalysis.m 3338
CheckCoordinates.m 3803
CheckIndices.m 4020
CheckProductIn2DProductTable.m 7603
Config.m 5249
DirectEMSCAnalysis.m 290
DoplotSimpleLegend.m 4445
GetAnalysisStructure.m 3696
GetClassindex.m 4190
GetDefaultPcaValues.m 3169
GetSamplePos.m 3647
IndicatorFunctionOfPCs.m 3122
IsBTree.m 4286
MakeEMSCZYDataFiles.m 3800
MakeRepresentableStringFrom2DGroupAssignment.m 3832
Obtain2DMWSequence.m 10972
Obtain2DPeakGroups.m 6275
PCAPlots.m 3745
PCAPT.m 6302
PCATC.m 5380
PlotByClassColor.m 6653
PlotEllipsoids.m 3641
PlotLegend.m 3656
PLSPT.m 6721
PLSTC.m 7016
QResiduals.m 3296
SetXAxis.m 3412
TsqOutliersCompare.m 4007
RandomizeOrder.m 3280
rAuto.m 3875
rEliminateOutliers.m 6438
rmncn.m 3644
Rndcv.m 10848
rPCA.m 5409
rsnv.m 3473
rTsqOutliers.m 4900
SaveClassdes.m 3633
savgol.m 4014
SelectSampleCombinations.m 4807
selectsamples.m 8169
SetUpdating.m 3943
ShowAnalysisList.m 3405
ShowClassComb.m 4766
ShowHistory.m 3517
snv.m 3408
StartEMSC.m 7314
std.m 3984
StopEMSC.m 7071
subback.m 3906
subbackmod.m 4537
subsasgn.m 10016
SubsClassDes.m 5101
SubsClassDes2.m 4409
subsref.m 9152
Subtract.m 3968
TransNorm.m 4735
trimmean.m 4042
TsqOutliers.m 4991
Varsel.m 9663
version.txt 23
viselim.m 4104
WithHold.m 7816
CellDisp.m 3316
CellString2Double.m 3110
FirstMax.m 3176
FirstMin.m 3166
GetComb.m 4704
GetXRanges.m 3392
INDFunc.m 4787
IsToolboxPresent.m 3833
LoadFile.m 3206
mean_woK.m 7858
mncn.m 2998
NDIND.m 4756
nmin.m 3199
normaliz.m 3177
printfigs.m 3654
QResidualsLimit.m 3926
ReplaceTabBySpaces.m 2947
SaveCell.m 3596
SaveFile.m 3452
savgol.m 3526
scale.m 3428
sgsdf.m 5128
GetPeakPos.m 5062
GetPeakPos2.m 5385
GetPeakPosFFT.m 4202
PeakPosFFT.m 6956
savgol.m 3701
sgsdf.m 5130
ShowPeakName.m 5838
ShowPeakName2.m 4549
ShowPeakNameBothSides.m 5015
snv.m 3045
SsqTable.m 3401
subback.m 5910
subbackmod.m 7954
TLim.m 4579
TransNorm.m 4406
ControlSampleNr.m 3954
ConvertInput2Num.m 3473
GetBdVar.m 3369
GetSelectedBd.m 3335
graphmap.fig 49480
graphmap.m 45565
graphplot.fig 67728
graphplot.m 52403
graphsel.fig 34032
graphsel.m 27213
graphtools.fig 48512
graphtools.m 33486
InitializeGraphplot.m 3323
InitializeGraphsel.m 3313
InitializeGraphtools.m 3354
LoadBdVar.m 3702
SetAsSelectedBd.m 3327
TransformClassdes.m 3058
Biodata manual.pdf 369233
isvector.m 3541
Contents.m 85
gpl-3.0.pdf 70632
About.m 3145
Add.m 14829
BTree.m 4681
Count.m 4101
display.m 2930
getitem.m 3264
GetItems.m 4497
GetItemWithMostValues.m 3506
GetSortedItemsList.m 3236
history.txt 511
isitem.m 3324
Plot.m 3538
ConvertToBTree.m 5210
DoCompare.m 4493
GetThem.m 3812
searchitem.m 3963
subsasgn.m 3833
subsref.m 3945
version.txt 51
WriteContentsToFile.m 4330
CatBlank.m 3285
loadcell.m 6019
LocateItem.m 4229
MakeVector.m 3487
mystrcmp.m 3945
str.m 5496
str2.m 3557
trimleft.m 3040
trimright.m 3063
trimstr.m 2996
Contents.m 79
DetermineClusters.m 6494
GetSPCAxisTypes.m 7169
GetTechniques.m 4905
gpl-3.0.pdf 70632
GSDendrogram.m 10429
GSImportspec.m 10716
GSSpcRead.m 33906
GSSpcReadStructure.m 3194
GSSpcWrite.m 37834
GSTools 0.4.3 manual.pdf 91185
GSToolsAbout.m 3157
history.html 3319
license.txt 1314

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