The following Matlab project contains the source code and Matlab examples used for biodata toolbox.
The Biodata toolbox is a comprehensive database system that stores measurement signals and related data, such as sample labels, signal collection date, etc.
The source code and files included in this project are listed in the project files section, please make sure whether the listed source code meet your needs there.
Project Files:
File Name | Size |
---|---|
About.m | 4279 |
AdaptPlot.m | 4747 |
AddClassdes.m | 4976 |
AddEmptyClassdes.m | 4189 |
AddHistory.m | 4007 |
AddMapDescription.m | 6815 |
AddNrClass.m | 3342 |
AddOneSample.m | 6158 |
AddSample.m | 6482 |
AddSampleDescriptions.m | 5327 |
Auto.m | 3733 |
Biodata.m | 9529 |
BTree.m | 5066 |
CalculateMeans.m | 12038 |
CalculateMeans2.m | 10692 |
Clean.m | 3484 |
ClearAnalysisList.m | 3518 |
ClearTrees.m | 3569 |
Count.m | 3340 |
CountClass.m | 3301 |
Create2DReactionTables.m | 6997 |
CTreeBuild.m | 4260 |
CTreeEval.m | 3890 |
Cumtrapz.m | 3332 |
DeleteClassdes.m | 4341 |
DeleteMarkedSamples.m | 4076 |
DeleteSampleCombinations.m | 5899 |
DeleteSampleDescriptions.m | 3795 |
delsample.m | 4895 |
diff.m | 4750 |
display.m | 3225 |
DoAnalysis.m | 11188 |
DoAnalysisForIdentification.m | 8190 |
DoIdentification.m | 13942 |
DoIdentification2.m | 9940 |
EliminateOutliers.m | 6245 |
EliminateOutlyingSamplesInGroup.m | 6148 |
EliminateSmallGroups.m | 6263 |
EMSC.m | 4971 |
FFT2Dcor.m | 5808 |
FindIndexOfFreq.m | 4120 |
GetAnalysisList.m | 4605 |
GetBDinfo.m | 8844 |
GetClassComb.m | 9774 |
GetClassList.m | 3634 |
GetClassVal.m | 4290 |
GetLastAnalysis.m | 3602 |
GetLv.m | 3036 |
GetSamples.m | 4700 |
GetXRange.m | 4052 |
GetXRanges.m | 4414 |
Hilb2DCor.m | 5765 |
Hilb2DCorMW.m | 10026 |
Hilb2DCorNCI.m | 8219 |
Hilb2DCorSS.m | 5275 |
IsClassDes.m | 3745 |
join.m | 17758 |
lda.m | 7749 |
LOO.m | 5406 |
mean.m | 4121 |
mean_wo.m | 4310 |
mean_woK.m | 4313 |
median.m | 4004 |
mjoin.m | 3477 |
mncn.m | 3647 |
Mult.m | 4027 |
normaliz.m | 4076 |
normalize.m | 3059 |
pca.m | 5032 |
plot.m | 7370 |
plot2Dc.m | 9787 |
plot2Dfreq.m | 8487 |
plot2Dphase.m | 4194 |
plot2Dsimple.m | 5375 |
plotb.m | 8295 |
plotchar.m | 8455 |
plotdiff.m | 7351 |
plotloads.m | 5462 |
plotn.m | 7921 |
plotnfigs.m | 7527 |
PlotOneMap.m | 4220 |
plotpoint.m | 16574 |
pls.m | 5617 |
AdaptPlotReduced.m | 5600 |
AddAnalysis.m | 3338 |
CheckCoordinates.m | 3803 |
CheckIndices.m | 4020 |
CheckProductIn2DProductTable.m | 7603 |
Config.m | 5249 |
DirectEMSCAnalysis.m | 290 |
DoplotSimpleLegend.m | 4445 |
GetAnalysisStructure.m | 3696 |
GetClassindex.m | 4190 |
GetDefaultPcaValues.m | 3169 |
GetSamplePos.m | 3647 |
IndicatorFunctionOfPCs.m | 3122 |
IsBTree.m | 4286 |
MakeEMSCZYDataFiles.m | 3800 |
MakeRepresentableStringFrom2DGroupAssignment.m | 3832 |
Obtain2DMWSequence.m | 10972 |
Obtain2DPeakGroups.m | 6275 |
PCAPlots.m | 3745 |
PCAPT.m | 6302 |
PCATC.m | 5380 |
PlotByClassColor.m | 6653 |
PlotEllipsoids.m | 3641 |
PlotLegend.m | 3656 |
PLSPT.m | 6721 |
PLSTC.m | 7016 |
QResiduals.m | 3296 |
SetXAxis.m | 3412 |
TsqOutliersCompare.m | 4007 |
RandomizeOrder.m | 3280 |
rAuto.m | 3875 |
rEliminateOutliers.m | 6438 |
rmncn.m | 3644 |
Rndcv.m | 10848 |
rPCA.m | 5409 |
rsnv.m | 3473 |
rTsqOutliers.m | 4900 |
SaveClassdes.m | 3633 |
savgol.m | 4014 |
SelectSampleCombinations.m | 4807 |
selectsamples.m | 8169 |
SetUpdating.m | 3943 |
ShowAnalysisList.m | 3405 |
ShowClassComb.m | 4766 |
ShowHistory.m | 3517 |
snv.m | 3408 |
StartEMSC.m | 7314 |
std.m | 3984 |
StopEMSC.m | 7071 |
subback.m | 3906 |
subbackmod.m | 4537 |
subsasgn.m | 10016 |
SubsClassDes.m | 5101 |
SubsClassDes2.m | 4409 |
subsref.m | 9152 |
Subtract.m | 3968 |
TransNorm.m | 4735 |
trimmean.m | 4042 |
TsqOutliers.m | 4991 |
Varsel.m | 9663 |
version.txt | 23 |
viselim.m | 4104 |
WithHold.m | 7816 |
CellDisp.m | 3316 |
CellString2Double.m | 3110 |
FirstMax.m | 3176 |
FirstMin.m | 3166 |
GetComb.m | 4704 |
GetXRanges.m | 3392 |
INDFunc.m | 4787 |
IsToolboxPresent.m | 3833 |
LoadFile.m | 3206 |
mean_woK.m | 7858 |
mncn.m | 2998 |
NDIND.m | 4756 |
nmin.m | 3199 |
normaliz.m | 3177 |
printfigs.m | 3654 |
QResidualsLimit.m | 3926 |
ReplaceTabBySpaces.m | 2947 |
SaveCell.m | 3596 |
SaveFile.m | 3452 |
savgol.m | 3526 |
scale.m | 3428 |
sgsdf.m | 5128 |
GetPeakPos.m | 5062 |
GetPeakPos2.m | 5385 |
GetPeakPosFFT.m | 4202 |
PeakPosFFT.m | 6956 |
savgol.m | 3701 |
sgsdf.m | 5130 |
ShowPeakName.m | 5838 |
ShowPeakName2.m | 4549 |
ShowPeakNameBothSides.m | 5015 |
snv.m | 3045 |
SsqTable.m | 3401 |
subback.m | 5910 |
subbackmod.m | 7954 |
TLim.m | 4579 |
TransNorm.m | 4406 |
ControlSampleNr.m | 3954 |
ConvertInput2Num.m | 3473 |
GetBdVar.m | 3369 |
GetSelectedBd.m | 3335 |
graphmap.fig | 49480 |
graphmap.m | 45565 |
graphplot.fig | 67728 |
graphplot.m | 52403 |
graphsel.fig | 34032 |
graphsel.m | 27213 |
graphtools.fig | 48512 |
graphtools.m | 33486 |
InitializeGraphplot.m | 3323 |
InitializeGraphsel.m | 3313 |
InitializeGraphtools.m | 3354 |
LoadBdVar.m | 3702 |
SetAsSelectedBd.m | 3327 |
TransformClassdes.m | 3058 |
Biodata manual.pdf | 369233 |
isvector.m | 3541 |
Contents.m | 85 |
gpl-3.0.pdf | 70632 |
About.m | 3145 |
Add.m | 14829 |
BTree.m | 4681 |
Count.m | 4101 |
display.m | 2930 |
getitem.m | 3264 |
GetItems.m | 4497 |
GetItemWithMostValues.m | 3506 |
GetSortedItemsList.m | 3236 |
history.txt | 511 |
isitem.m | 3324 |
Plot.m | 3538 |
ConvertToBTree.m | 5210 |
DoCompare.m | 4493 |
GetThem.m | 3812 |
searchitem.m | 3963 |
subsasgn.m | 3833 |
subsref.m | 3945 |
version.txt | 51 |
WriteContentsToFile.m | 4330 |
CatBlank.m | 3285 |
loadcell.m | 6019 |
LocateItem.m | 4229 |
MakeVector.m | 3487 |
mystrcmp.m | 3945 |
str.m | 5496 |
str2.m | 3557 |
trimleft.m | 3040 |
trimright.m | 3063 |
trimstr.m | 2996 |
Contents.m | 79 |
DetermineClusters.m | 6494 |
GetSPCAxisTypes.m | 7169 |
GetTechniques.m | 4905 |
gpl-3.0.pdf | 70632 |
GSDendrogram.m | 10429 |
GSImportspec.m | 10716 |
GSSpcRead.m | 33906 |
GSSpcReadStructure.m | 3194 |
GSSpcWrite.m | 37834 |
GSTools 0.4.3 manual.pdf | 91185 |
GSToolsAbout.m | 3157 |
history.html | 3319 |
license.txt | 1314 |