Gene-signatures finder

A a steepest ascending algorithm is used to find an ensemble gene-signature.

The source code and files included in this project are listed in the project files section, please make sure whether the listed source code meet your needs there.

Project Files: 

File NameSizeDate
geNSCLC.rda 48830 December 11 2013 13:13:22
stNSCLC.rda 1254 December 11 2013 13:13:22
DESCRIPTION 744 December 11 2013 13:13:22
BHcorrection.Rd 1492 December 11 2013 13:13:22
BICs.Rd 2920 December 11 2013 13:13:22
classify.Rd 2657 December 11 2013 13:13:22
ensembleTable.Rd 1784 December 11 2013 13:13:22
geNSCLC.Rd 1342 December 11 2013 13:13:22
goodAndPoorClassification.Rd 3338 December 11 2013 13:13:22
importance.Rd 2647 December 11 2013 13:13:22
NCPUS.Rd 1523 December 11 2013 13:13:22
puttingAllTogether.Rd 3104 December 11 2013 13:13:22
removeGeneFrom.Rd 2732 December 11 2013 13:13:22
searchResultsSummaryTable.Rd 2487 December 11 2013 13:13:22
seedsFinder.Rd 4230 December 11 2013 13:13:22
signatureFinder.Rd 4840 December 11 2013 13:13:22
signatureSummaryTable.Rd 2357 December 11 2013 13:13:22
stNSCLC.Rd 1041 December 11 2013 13:13:22
testGE.Rd 3692 December 11 2013 13:13:22
MD5 2616 December 11 2013 13:13:22
NAMESPACE 223 December 11 2013 13:13:22
areDataNotLoaded.R 316 December 11 2013 13:13:22
bbootstrap.R 196 December 11 2013 13:13:22
BHcorrection.R 312 December 11 2013 13:13:22
BICs.R 1398 December 11 2013 13:13:22
checkGeneForSeed.R 1095 December 11 2013 13:13:22
classify.R 170 December 11 2013 13:13:22
dMixNorm.R 120 December 11 2013 13:13:22
ensembleTable.R 2051 December 11 2013 13:13:22
evaluateGeneSequence.R 1442 December 11 2013 13:13:22
findBest.R 598 December 11 2013 13:13:22
geneSignatureFinder-internal.R 37 December 11 2013 13:13:22
goodAndPoorClassification.R 948 December 11 2013 13:13:22
importance.R 3281 December 11 2013 13:13:22
mergeSignatures.R 2567 December 11 2013 13:13:22
NCPUS.R 2293 December 11 2013 13:13:22
normalApproximation.R 665 December 11 2013 13:13:22
pamUnbiased.R 1649 December 11 2013 13:13:22
parallelFindBest.R 934 December 11 2013 13:13:22
parallelSignatureFinder.R 7764 December 11 2013 13:13:22
puttingAllTogether.R 7584 December 11 2013 13:13:22
pValueFun.R 419 December 11 2013 13:13:22
removeGeneFrom.R 3432 December 11 2013 13:13:22
searchResultsSummaryTable.R 954 December 11 2013 13:13:22
seedsFinder.R 1164 December 11 2013 13:13:22
sequentialSignatureFinder.R 7321 December 11 2013 13:13:22
signatureFinder.R 930 December 11 2013 13:13:22
signatureSummaryTable.R 1965 December 11 2013 13:13:22
testGE.R 3467 December 11 2013 13:13:22
tValueFun.R 414 December 11 2013 13:13:22
To download this source code, please visit Download Gene-signatures finder